|
|
|
@282
|
[282]
|
11/13/09 10:12:28 |
cholt |
fix gmhmm_wrap failure on overmasking bug |
|
|
|
@281
|
[281]
|
11/12/09 16:09:36 |
cholt |
no longer thread dependant, fixed overhang bug, and evidence clustering … |
|
|
|
@280
|
[280]
|
11/10/09 12:27:50 |
bmoore |
Minor tweak to an error message in lib/Widget/blastn.pm |
|
|
|
@277
|
[277]
|
11/04/09 09:39:38 |
cholt |
attempt to fix exonerate holdover errors |
|
|
|
@275
|
[275]
|
10/12/09 14:06:24 |
cholt |
added some changes to how tmp is used and fixed blastrm params |
|
|
|
@273
|
[273]
|
10/03/09 16:26:20 |
cholt |
fix to check if snap, augustus, exonerate and RepeatMasker? |
|
|
|
@271
|
[271]
|
09/30/09 14:05:39 |
cholt |
make runlog softmask instensitive for old data. Fix fgenesh xdef errors |
|
|
|
@260
|
[260]
|
09/09/09 13:38:19 |
cholt |
made indexing search less IO intensive |
|
|
|
@249
|
[249]
|
08/31/09 17:07:51 |
cholt |
index error fixes |
|
|
|
@248
|
[248]
|
08/31/09 08:34:40 |
cholt |
weird index error and blast merge error |
|
|
|
@246
|
[246]
|
08/25/09 12:23:02 |
cholt |
fix genemark bug |
|
|
|
@245
|
[245]
|
08/24/09 17:03:49 |
cholt |
fgenesh fix |
|
|
|
@244
|
[244]
|
08/21/09 16:52:11 |
cholt |
bug in repeat mask cause by prok upgrade |
|
|
|
@242
|
[242]
|
08/18/09 14:25:27 |
cholt |
prokaryote maker |
|
|
|
@231
|
[231]
|
07/14/09 11:36:10 |
cholt |
fix formatdb |
|
|
|
@225
|
[225]
|
06/22/09 16:20:18 |
cholt |
fix more mpi_iprscan |
|
|
|
@222
|
[222]
|
06/22/09 12:34:39 |
cholt |
update maker |
|
|
|
@221
|
[221]
|
06/22/09 12:33:44 |
cholt |
mpi_iprscan added |
|
|
|
@216
|
[216]
|
05/13/09 09:32:23 |
cholt |
augustus update |
|
|
|
@215
|
[215]
|
05/13/09 09:17:32 |
cholt |
augustus fix |
|
|
|
@214
|
[214]
|
05/12/09 17:00:43 |
cholt |
fix for new augustus output |
|
|
|
@211
|
[211]
|
04/30/09 14:02:43 |
cholt |
added better genemark support |
|
|
|
@207
|
[207]
|
04/28/09 14:58:46 |
cholt |
fix error checking in widgets |
|
|
|
@182
|
[182]
|
03/26/09 22:50:47 |
cholt |
augustus bug fix and gff3.tiers edit |
|
|
|
@173
|
[173]
|
03/24/09 15:08:16 |
cholt |
update README |
|
|
|
@172
|
[172]
|
03/23/09 23:09:11 |
cholt |
added genemark |
|
|
|
@168
|
[168]
|
03/19/09 16:55:49 |
cholt |
added check pn abinit overhang |
|
|
|
@159
|
[159]
|
03/09/09 00:50:16 |
cholt |
maker update for all oomycete |
|
|
|
@151
|
[151]
|
02/20/09 12:38:14 |
cholt |
maker update CDS has stop codon and other opts |
|
|
|
@143
|
[143]
|
02/06/09 17:02:43 |
cholt |
fix weird fasta errors |
|
|
|
@139
|
[139]
|
01/28/09 12:54:41 |
cholt |
fix gff3 parsing error and blast empty error |
|
|
|
@137
|
[137]
|
01/27/09 16:59:05 |
cholt |
no valid contexrts error fix |
|
|
|
@127
|
[127]
|
01/23/09 12:58:16 |
cholt |
major maker update, gff passthrough, evaluator integration, tblastx, ncbi, … |
|
|
|
@124
|
[124]
|
01/12/09 11:57:19 |
myandell |
added qrna widget, hsp and hit classes |
|
|
|
@118
|
[118]
|
10/21/08 16:33:29 |
cholt |
changes to fgenesh modules |
|
|
|
@117
|
[117]
|
10/21/08 15:41:33 |
cholt |
add fgenesh modules |
|
|
|
@109
|
[109]
|
10/02/08 15:00:55 |
cholt |
tblastx added to maker |
|
|
|
@108
|
[108]
|
09/26/08 11:26:00 |
cholt |
tblastx added |
|
|
|
@89
|
[89]
|
08/26/08 17:15:30 |
cholt |
error |
