root/lib/Process


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Rev Chgset Date Author Log Message
(edit) @277 [277] 11/04/09 09:39:38 cholt attempt to fix exonerate holdover errors
(edit) @271 [271] 09/30/09 14:05:39 cholt make runlog softmask instensitive for old data. Fix fgenesh xdef errors
(edit) @259 [259] 09/08/09 16:43:05 cholt mpi_iprscan more maker like behavior
(edit) @258 [258] 09/08/09 11:32:56 cholt better iprscan wrapper
(edit) @256 [256] 09/04/09 10:45:29 cholt Update tiers
(edit) @255 [255] 09/04/09 09:54:32 cholt update how chunks and tiers work to accept chunk type
(edit) @254 [254] 09/04/09 09:46:41 cholt iprscan and gff3_merge and fastamerge update
(edit) @250 [250] 09/01/09 11:26:15 cholt fix run_all method and next_chunk method in MpiTiers?
(edit) @242 [242] 08/18/09 14:25:27 cholt prokaryote maker
(edit) @229 [229] 07/12/09 20:49:05 cholt gmod build
(edit) @228 [228] 07/07/09 15:20:38 cholt update mpi_iprscan
(edit) @225 [225] 06/22/09 16:20:18 cholt fix more mpi_iprscan
(edit) @221 [221] 06/22/09 12:33:44 cholt mpi_iprscan added
(edit) @197 [197] 04/08/09 13:54:07 cholt mapping formard now works
(edit) @194 [194] 04/07/09 15:36:10 cholt fix GFF dumper error, fix bad CDS error, fix change gffdb error, fix uniw …
(edit) @185 [185] 03/31/09 16:14:50 cholt fix auto_annotator error and control files error and updarte gff3.tiers
(edit) @183 [183] 03/31/09 15:17:40 cholt map names forward, CDS competition on opposite strands accounted for
(edit) @181 [181] 03/26/09 16:44:29 cholt update maker to accept min protein lengths
(edit) @172 [172] 03/23/09 23:09:11 cholt added genemark
(edit) @165 [165] 03/18/09 14:09:53 cholt fix evidence merge error
(edit) @162 [162] 03/17/09 13:31:36 cholt evaluator ok to run in new maker
(edit) @160 [160] 03/16/09 14:18:16 cholt Maker Updates for OOmycete genome, clone hsps, hits in join.pm
(edit) @159 [159] 03/09/09 00:50:16 cholt maker update for all oomycete
(edit) @151 [151] 02/20/09 12:38:14 cholt maker update CDS has stop codon and other opts
(edit) @146 [146] 02/09/09 16:49:11 cholt temporarily disabled evaluator AED
(edit) @144 [144] 02/06/09 23:23:19 cholt mpi maker updated
(edit) @129 [129] 01/23/09 13:00:25 cholt remove redundant files
(edit) @128 [128] 01/23/09 12:59:29 cholt missing MakerChunk?
(edit) @127 [127] 01/23/09 12:58:16 cholt major maker update, gff passthrough, evaluator integration, tblastx, ncbi, …
(edit) @122 [122] 11/21/08 14:57:37 hao --
(edit) @113 [113] 10/03/08 12:45:43 cholt tblastx fix
(edit) @112 [112] 10/03/08 12:44:11 cholt tblastx fix
(edit) @111 [111] 10/03/08 12:04:06 cholt tblastx mpi_maker
(edit) @110 [110] 10/02/08 15:38:21 cholt tblastx
(edit) @109 [109] 10/02/08 15:00:55 cholt tblastx added to maker
(edit) @103 [103] 09/16/08 15:52:07 cholt count fix
(edit) @101 [101] 09/15/08 13:35:22 cholt clean up temp automatically
(edit) @100 [100] 09/15/08 11:57:35 cholt attempt to fix fasta index error
(edit) @99 [99] 09/09/08 16:23:20 cholt snap is now optional
(edit) @97 [97] 09/09/08 13:02:30 cholt fix mpi related issues
(edit) @93 [93] 08/28/08 12:31:28 cholt snap not always called now
(add) @89 [89] 08/26/08 17:15:30 cholt error
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