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Rev Chgset Date Author Log Message
(edit) @223 [223] 06/22/09 12:36:39 cholt remove genbank converter
(edit) @222 [222] 06/22/09 12:34:39 cholt update maker
(edit) @221 [221] 06/22/09 12:33:44 cholt mpi_iprscan added
(edit) @217 [217] 05/14/09 03:00:41 cholt added genbank converter
(edit) @213 [213] 05/06/09 13:03:22 bmoore minor changes to iprscan_batch and fasta_merge
(edit) @208 [208] 04/28/09 14:59:45 cholt added usage to iprscan_batch
(edit) @206 [206] 04/24/09 17:41:35 cholt fix add_utr_gff
(edit) @205 [205] 04/24/09 16:56:11 cholt added lock control and other bug fixes
(edit) @204 [204] 04/21/09 17:55:00 bmoore added maker_functional_fasta maker_functional_gff ipr_update_gff
(edit) @202 [202] 04/14/09 12:53:07 cholt fixed some gff3 issues
(edit) @201 [201] 04/14/09 12:52:05 cholt added split_fasta
(edit) @199 [199] 04/10/09 12:00:34 bmoore updates to ID mapping scripts and reformatted README for printer and …
(edit) @198 [198] 04/08/09 14:42:34 cholt Changed back to three control files, and added mpi_evaluator
(edit) @196 [196] 04/07/09 16:40:10 cholt commiting iprscan tools and gtf tools
(edit) @195 [195] 04/07/09 16:36:40 cholt fix dumper GFFDB, and added again option to maker
(edit) @194 [194] 04/07/09 15:36:10 cholt fix GFF dumper error, fix bad CDS error, fix change gffdb error, fix uniw …
(edit) @192 [192] 04/04/09 12:26:02 bmoore Adding maker_map_ids, map_fasta_ids & map_gff_ids
(edit) @188 [188] 04/01/09 15:42:04 cholt fix auto_annotator predictions not moving forward bug
(edit) @183 [183] 03/31/09 15:17:40 cholt map names forward, CDS competition on opposite strands accounted for
(edit) @176 [176] 03/25/09 10:52:13 cholt update use lib in maker
(edit) @174 [174] 03/25/09 10:37:38 cholt added DBI and DBD::SQLite
(edit) @162 [162] 03/17/09 13:31:36 cholt evaluator ok to run in new maker
(edit) @159 [159] 03/09/09 00:50:16 cholt maker update for all oomycete
(edit) @154 [154] 02/20/09 13:42:57 cholt fasta_merge added
(edit) @151 [151] 02/20/09 12:38:14 cholt maker update CDS has stop codon and other opts
(edit) @146 [146] 02/09/09 16:49:11 cholt temporarily disabled evaluator AED
(edit) @144 [144] 02/06/09 23:23:19 cholt mpi maker updated
(edit) @143 [143] 02/06/09 17:02:43 cholt fix weird fasta errors
(edit) @134 [134] 01/25/09 11:32:42 hao Added new AED feature
(edit) @131 [131] 01/23/09 16:22:26 cholt fix fasta index error
(edit) @127 [127] 01/23/09 12:58:16 cholt major maker update, gff passthrough, evaluator integration, tblastx, ncbi, …
(edit) @123 [123] 11/26/08 10:50:21 hao --
(edit) @116 [116] 10/21/08 13:55:49 cholt added tools to maker
(edit) @111 [111] 10/03/08 12:04:06 cholt tblastx mpi_maker
(edit) @109 [109] 10/02/08 15:00:55 cholt tblastx added to maker
(edit) @108 [108] 09/26/08 11:26:00 cholt tblastx added
(edit) @103 [103] 09/16/08 15:52:07 cholt count fix
(edit) @101 [101] 09/15/08 13:35:22 cholt clean up temp automatically
(edit) @99 [99] 09/09/08 16:23:20 cholt snap is now optional
(edit) @93 [93] 08/28/08 12:31:28 cholt snap not always called now
(add) @89 [89] 08/26/08 17:15:30 cholt error
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